Detection of Protein‑protein Interactions by FRET and BRET Methods
Authors:
E. Matoulková; B. Vojtěšek
Authors‘ workplace:
Regionální centrum aplikované molekulární onkologie, Masarykův onkologický ústav, Brno
Published in:
Klin Onkol 2014; 27(Supplementum): 82-86
Overview
Nowadays, in vivo protein‑protein interaction studies have become preferable detecting methods that enable to show or specify (already known) protein interactions and discover their inhibitors. They also facilitate detection of protein conformational changes and discovery or specification of signaling pathways in living cells. One group of in vivo methods enabling these findings is based on fluorescent resonance energy transfer (FRET) and its bioluminescent modification (BRET). They are based on visualization of protein‑protein interactions via light or enzymatic excitation of fluorescent or bioluminescent proteins. These methods allow not only protein localization within the cell or its organelles (or small animals) but they also allow us to quantify fluorescent signals and to discover weak or strong interaction partners. In this review, we explain the principles of FRET and BRET, their applications in the characterization of protein‑protein interactions and we describe several findings using these two methods that clarify molecular and cellular mechanisms and signals related to cancer biology.
Key words:
FRET – BRET – imaging methods – protein‑protein interaction in vivo
This work was supported by the Czech Science Foundation projects P206/12/G151 and 13--00956S, by the European Regional Development Fund and the State Budget of the Czech Republic (RECAMO, CZ.1.05/2.1.00/03.0101) and by MH CZ – DRO (MMCI, 00209805).
The authors declare they have no potential conflicts of interest concerning drugs, products, or services used in the study.
The Editorial Board declares that the manuscript met the ICMJE “uniform requirements” for biomedical papers.
Submitted:
20. 1. 2014
Accepted:
31. 3. 2014
Sources
1. Prasher DC, Eckenrode VK, Ward WW et al. Primary structure of the Aequorea victoria green‑ fluorescent protein. Gene 1992; 111(2): 229−233.
2. Bertrand L, Parent S, Caron M et al. The BRET2/ arrestin assay in stable recombinant cells: a platform to screen for compounds that interact with G protein‑coupled receptors (GPCRS). J Recept Signal Transduct Res 2002; 22(1−4): 533– 541.
3. De A, Loening AM, Gambhir SS. An improved bioluminescence resonance energy transfer strategy for imaging intracellular events in single cells and living subjects. Cancer Res 2007; 67(15): 7175−7183.
4. Zadran S, Standley S, Wong K et al. Fluorescence resonance energy transfer (FRET)‑based biosensors: visualizing cellular dynamics and bioenergetics. Appl Microbiol Biotechnol 2012; 96(4): 895– 902. doi: 10.1007/ s00253- 012--4449- 6.
5. Aoki K, Komatsu N, Hirata E et al. Stable expression of FRET biosensors: a new light in cancer research. Cancer Sci 2012; 103(4): 614– 619. doi: 10.1111/ j.1349- 7006.2011.02196.x.
6. Day RN, Davidson MW. Fluorescent proteins for FRET microscopy: monitoring protein interactions in living cells. Bioessays 2012; 34(5): 341– 350. doi: 10.1002/ bies.201100098.
7. Kiyokawa E, Hara S, Nakamura T et al. Fluorescence (Förster) resonance energy transfer imaging of oncogene activity in living cells. Cancer Sci 2006; 97(1): 8– 15.
8. Kim K, Barhoumi R, Burghardt R et al. Analysis of estrogen receptor alpha‑ Sp1 interactions in breast cancer cells by fluorescence resonance energy transfer. Mol Endocrinol 2005; 19(4): 843– 854.
9. Mizutani T, Kondo T, Darmanin S et al. A novel FRET‑based biosensor for the measurement of BCR‑ ABL activity and its response to drugs in living cells. Clin Cancer Res 2010; 16(15): 3964– 3975. doi: 10.1158/ 1078– 0432.CCR‑ 10- 0548.
10. Boute N, Jockers R, Issad T. The use of resonance energy transfer in high‑throughput screening: BRET versus FRET. Trends Pharmacol Sci 2002; 23(8): 351– 354.
11. Sturmey RG, O’Toole PJ, Leese HJ. Fluorescence resonance energy transfer analysis of mitochondrial: lipid association in the porcine oocyte. Reproduction 2006; 132(6): 829– 837.
12. Bacart J, Corbel C, Jockers R et al. The BRET technology and its application to screening assays. Biotechnol J 2008; 3(3): 311−324. doi: 10.1002/ biot.200700222.
13. Arai R, Nakagawa H, Tsumoto K et al. Demonstration of a homogeneous noncompetitive immunoassay based on bioluminescence resonance energy transfer. Anal Biochem 2001; 289(1): 77– 81.
14. Xia Z, Rao J. Biosensing and imaging based on bioluminescence resonance energy transfer. Curr Opin Biotechnol 2009; 20(1): 37−44. doi: 10.1016/ j.copbio.2009.01.001.
15. Xu Y, Piston DW, Johnson CH. A bioluminescence resonance energy transfer (BRET) system: application to interacting circadian clock proteins. Proc Natl Acad Sci USA 1999; 96(1): 151−156.
16. Arai R, Nakagawa H, Kitayama A et al. Detection of proteinprotein interaction by bioluminescence resonance energy transfer from firefly luciferase to red fluorescent protein. J Biosci Bioeng 2002; 94(4): 362– 364.
17. Yamakawa Y, Ueda H, Kitayama A et al. Rapid homogeneous immunoassay of peptides based on bioluminescence resonance energy transfer from firefly luciferase. J Biosci Bioeng 2002; 93(6): 537– 542.
18. Loening AM, Wu AM, Gambhir SS. Red‑ shifted Renilla reniformis luciferase variants for imaging in living subjects. Nat Methods 2007; 4(8): 641– 643.
19. De A, Ray P, Loening AM, Gambhir SS. BRET3: A red‑ shifted bioluminescence resonance energy transfer (BRET)‑based integrated platform for imaging protein‑protein interactions from single live cells and living animals. FASEB J 2009; 23(8): 2702– 2709. doi: 10.1096/ fj.08- -118919.
20. Yao H, Zhang Y, Xiao F et al. Quantum dot/ bioluminescence resonance energy transfer based highly sensitive detection of proteases. Angew Chem Int Ed Engl 2007; 46(23): 4346−4349.
21. Boute N, Pernet K, Issad T. Monitoring the activation state of the insulin receptor using bioluminescence resonance energy transfer. Mol Pharmacol 2001; 60(4): 640– 645.
22. Gavet O, Pines J. Progressive activation of Cyclin B1- Cdk1 coordinates entry to mitosis. Dev Cell 2010; 18(4): 533– 543. doi: 10.1016/ j.devcel.2010.02.013.
23. Couturier C, Deprez B. Setting up a bioluminescence resonance energy transfer high throughput screening assay to search for protein/ protein interaction inhibitors in mammalian cells. Front Endocrinol (Lausanne) 2012; 3: 100. doi: 10.3389/ fendo.2012.00100.
24. Aoki K, Kamioka Y, Matsuda M. Fluorescence resonance energy transfer imaging of cell signaling from in vitro to in vivo: basis of biosensor construction, live imaging, and image processing. Dev Growth Differ 2013; 55(4): 515−522. doi: 10.1111/ dgd.12039.
Labels
Paediatric clinical oncology Surgery Clinical oncologyArticle was published in
Clinical Oncology
2014 Issue Supplementum
Most read in this issue
- Protein Expression and Purification
- Methods for Studying Tumor Cell Migration and Invasiveness
- Next Generation Sequencing – Application in Clinical Practice
- Analysis of Protein Using Mass Spectrometry